CCP4: Coordinate Utilities roadmap

	CCP4 Roadmaps
	COORDINATE UTILITIES

CCP4i task	Associated CCP4 program(s)
Cell Content Analysis	MATTHEWS_COEF Misha Isupov's Jiffy to calculate Matthews coefficient
Convert Coordinate Formats	COORDCONV Interconvert various coordinate formats
Edit PDB File	PDBSET Various useful manipulations on coordinate files
Superpose Molecules	LSQKAB Apply various transformations to coordinate files TOP Topological comparison program

BONES2PDB: Make a PDB pseudo-coordinate file from a bones file
GENSYM: Generate sites by symmetry
GEOMCALC: Molecular geometry calculations
HGEN: Generate hydrogen atom positions for proteins
MAKEDICT: Converts PDB file to TNT or PROTIN dictionaries and PROTIN to PDB
RWCONTENTS: Count atoms by type
SORTWATER: Sort waters by the protein chain to which they "belong"
STEREO: Extract coordinates from stereo diagrams
WATERTIDY: Rationalise waters at the end of refinement
WATPEAK: Select peaks from peakmax and put them close to the appropriate protein atoms